ANDÚJAR, C., ARRIBAS, P., GRAY, C., BRUCE, C., WOODWARD, G., YU, D. W., & VOGLER, A. P. Metabarcoding of freshwater invertebrates to detect the effects of a pesticide spill. Molecular Ecology.  27(1), 146–166. 2018

KUSY, D., MOTYKA, M., ANDÚJAR, C., BOCEK, M., MASEK, M., SKLENAROVA, K., GALUSZKA, P., BOCAKOVA, M., VOGLER, A.P. & BOCAK, L. Genome sequencing of Rhinorhipus exposes an early branch of the Coleoptera. Frontiers in Zoology. 15 (1), 21. 2018

PÉREZ-GONZÁLEZ, S., ANDÚJAR, C., LANTERO, E. & ZABALLOS, J. P. On the verge of below-ground speciation: a new species complex of microendemic endogean carabid beetles, Typhlocharis Dieck, 1869 (Coleoptera: Carabidae: Anillini), from south-west Iberian Peninsula. Arthropod Systematics & Phylogeny. In press. 2018

PÉREZ-GONZÁLEZ, S., ANDÚJAR, C., & ZABALLOS, J. P. Hidden biodiversity: Total evidence phylogenetics and evolution of morphological traits in a highly diverse lineage of endogean ground beetles, Typhlocharis Dieck, 1869 (Carabidae, Trechinae, Anillini). Cladistics. 1–25. In press. 2018

ANDÚJAR, C., PÉREZ-GONZÁLEZ, S., ARRIBAS, P., ZABALLOS, J. P., VOGLER, A. P., & RIBERA, I. Speciation below ground: Tempo and mode of diversification in a radiation of endogean ground beetles. Molecular Ecology, 26(21). 2017

ANDÚJAR, C.; ARRIBAS, P.; VOGLER, A. Terra incognita of soil biodiversity: unseen invasions under our feet. Molecular Ecology. 26, 3087–3089. 2017 Perspective paper.

ANDÚJAR, C.; ARRIBAS, P.; LINARD, B.; KUNDRATA, R.; BOCAK, L.; VOGLER, A.P. The mitochondrial genome of Iberobaenia (Coleoptera: Iberobaeniidae): First rearrangement of protein coding genes in the beetles. Mitochondrial DNA. ISSN 1940-1736. 2017

LINARD, B.; ARRIBAS, P.; ANDÚJAR, C.; CRAMPTON-PLATT, A.; VOGLER, A.P. First mitochondrial rearrangement in the insect Order Trichoptera: mitogenome of Hydropsyche pellucidulla (Megaloptera: Hydropsychidae). Mitochondrial DNA. ISSN 1940-1736. 2017

ZABALLOS JP, ANDÚJAR C, PÉREZ-GONZÁLEZ S. A small carabid for a huge entomologist: Typhlocharis amara, a new species dedicated to Dr. Fritz Hieke. Entomologische Blätter und Coleoptera. 112, pp. 465 – 473 ISSN 0013-8835. 2016

ANDÚJAR, C.; FAILLE, A.; PÉREZ, S. ZABALLOS, J.; VOGLER, A.P.; RIBERA, I. Gondwanian relicts and oceanic dispersal in a cosmopolitan radiation of euedaphic ground beetles. Molecular Phylogenetics and Evolution. 24, pp. 3603 – 3617. ISSN 1055-7903. 2016

BOCAK, L.; KUNDRATA, R.; ANDÚJAR, C.; VOGLER, A.P. The discovery of Iberobaeniidae (Coleoptera: Elateroidea), a new family of beetles from Spain with immatures detected by environmental DNA sequencing. Proceedings of the Royal Society of London B. ISSN 1471-2954. 2016

ARRIBAS, P.; LINARD, B.; ANDÚJAR, C.; CRAMPTON-PLATT, A.; VOGLER, A.P. Lessons from metagenome skimming of arthropod-preserving ethanol. Molecular Ecology Resources. 9 – 7, pp. 1071 – 1081. 2016. ISSN 1755-0998. 2016

ARRIBAS, P.; ANDÚJAR, C.; HOPKINS, K.; SHEPHERD, M. & VOGLER, A.P. Metabarcoding and mitochondrial metagenomics of endogean arthropods to unveil mesofauna of the soil. Methods in Ecology and Evolution. ISSN 2041-210X. 2016

ANDÚJAR, C., ARRIBAS, P., RUZICKA, F., CRAMPTON-PLATT, A., TIMMERMANS M.J., A. & VOGLER, A.P. Phylogenetic community ecology of soil biodiversity using mitochondrial metagenomics. Molecular Ecology, 23(17): 4344-4361. 2015 Link pdf *Perspective on our paper published in same Molecular Ecology issue*

ANDÚJAR, C., ARRIBAS, P., RUIZ, C., SERRANO, J., GÓMEZ-ZURITA, J. Integration of conflict into Integrative Taxonomy: Fitting hybridization in species delimitation of Mesocarabus (Coleoptera: Carabidae). Molecular Ecology. 17, 4344-61. 2014 Link pdf *Perspective on our paper published in same Molecular Ecology issue*

FAILLE, A., ANDÚJAR, C., FADRIQUE, F., RIBERA, I. Late Miocene origin of aIbero-Maghrebian clade of ground beetles with multiple colonisations of the subterranean environment. Journal of Biogeography. 41, 1979–1990. 2014

ANDÚJAR, C., SORIA-CARRASCO, V., SERRANO, J., GÓMEZ-ZURITA, J. Congruence test of molecular clock calibration hypotheses based on Bayes factor comparisons. Methods in Ecology and Evolution, 5, 226-242. 2014

ARRIBAS, P.; ANDÚJAR, C.; ABELLÁN, P.; VELASCO, J.; MILLÁN, A.; RIBERA, I. Tempo and mode of the multiple origins of salinity tolerance in a water beetle lineage. Molecular ecology, 23, 360-373. 2014 Link pdf

ARRIBAS, P.; ANDÚJAR, C.; SÁNCHEZ-FERNÁNDEZ, D.; ABELLÁN, P.; MILLÁN, M. Integrative taxonomy and conservation of cryptic beetles in the Mediterranean region (Hydrophilidae). Zoologica Scripta, 42, 182-200. 2013 Link pdf

ANDÚJAR, C.; SERRANO, J.; GÓMEZ-ZURITA, J. Winding up the molecular clock in the genus Carabus Coleoptera: Carabidae: assessment of methodological decisions on rate and node age estimation. BMC Evolutionary Biology, 12, 40. 2012

ARRIBAS, P.; VELASCO, J.; ABELLÁN, P.; SÁNCHEZ-FERNÁNDEZ, D.; ANDÚJAR, C.; CALOSI, P.; MILLÁN, A.; RIBERA, I.; BILTON, D.T. Dispersal ability rather than ecological tolerance drives differences in range size between lentic and lotic water beetles (Coleoptera: Hydrophilidae). Journal of Biogeography, 39, 984-994. 2012

ANDÚJAR, C.; GÓMEZ-ZURITA, J.; RASPLUS, J-Y.; SERRANO, J. Molecular systematics and evolution of the subgenus Mesocarabus Thomson 1875 (Coleoptera: Carabidae: Carabus) based on mitochondrial and nuclear DNA. Zoological Journal of the Linnean Society. 166, 787–804. 2012

ANDÚJAR, C.; HERNANDO, C.; RIBERA, I. A new endogean, anophthalmous species of Parazuphium Jeannel from Northern Morocco (Coleoptera, Carabidae), with new molecular data for the tribe Zuphiini. Zookeys,103, 49-62. 2011

BAENA, M.; LENCINA, J.L.; ANDÚJAR, C. Presencia de Lathropus sepicola Müller, 1821 (Coleoptera: Laemophloeidae) en Sierra Madrona, Ciudad Real España. Boletín de la Sociedad Entomológica Aragonesa, 48, 332. 2011

ANDÚJAR, C.; GREBENNIKOV, V.V.; LENCINA, J.L.; SERRANO, J.A new Typhlocharis (Coleoptera: Carabidae: Anillini) from Spain: combining adult and larval morphological data with DNA information. Zootaxa, 2845, 47-57. 2010

LENCINA, J.L.; BAHILLO, P.; LÓPEZ-COLÓN, J.I.; ANDÚJAR, C.; GALLEGO, D. Aportaciones a la corología de la superfamilia Cleroidea en el cuadrante suroriental de la Península Ibérica (Insecta, Coleoptera). Boletín de la Sociedad Entomológica Aragonesa, 47, 389-394. 2010

SERRANO, J.; SÁNCHEZ-GEA, J.F.; ANDÚJAR, C.; RUIZ, C.; GALIÁN, J. Especiación en los Carábidos Ibéricos Insecta, Coleoptera.Evolución y Adaptación. 150 años después del Origen de las Especies. 104 – 112.Valencian Community Obrapropia, 2009

ANDÚJAR , C.; LENCINA, J.L.; SERRANO, J. Typhlocharis Dieck, 1869 (Coleoptera: Carabidae, Anillini): a new species from the Iberian Peninsula, with notes about its relationships and the evolution of the diecki species group. Zootaxa, 1842, 35-44. 2008

SERRANO, J.; RUIZ, C.; ANDÚJAR, C.; LENCINA, J.L. Land use and ground beetle assemblages in the national park of Cabañeros, Central Spain. (Coleoptera: Carabidae). Proceedings of the 11th european carabidologists meeting. G. Lövei & S. Toft. eds. DIAS Report Plant Production, No. 114, Danish Institute of Agricultural Sciences. 275 – 289. 2005